Ψ PGLYRP3 - Orcinus orca

Reference Gene:
Job_ID:
Curator:
GlossID Species Gene Loss Mechanism Loss Type Lineage Specific Evidence Accession Nr.
GL_ZWCZS7 Orcinus orca Exon(s) deletion Full Yes Single individual SRA XM_004285667.2

Statements

Type Excerpt DOI
Functional "PGLYRP1/3/4 encode peptidoglycan recognition proteins, which are receptors important for antimicrobial function and for maintaining a healthy gut microbiome (75, 76)." 10.1126/sciadv.aaw6671
Timing of Loss "The deletion of the last two exons has shared deletion breakpoints in all species (except the sperm whale, where no alignment chain spans this region), consistent with a gene loss in the cetacean stem lineage." 10.1126/sciadv.aaw6671
Other "Furthermore, while mammals generally have four genes encoding peptidoglycan recognition proteins, which are receptors important for antimicrobial function and for maintaining a healthy gut microbiome, cetaceans have lost three of these four genes (PGLYRP1/3/4; figs. S17 to S19 and table S2)." 10.1126/sciadv.aaw6671

Curator Observations

See reference supplementary material.