Ψ OMP - Physeter catodon

Reference Gene:
Job_ID:
Curator:
GlossID Species Gene Loss Mechanism Loss Type Lineage Specific Evidence Accession Nr.
GL_3SHAAR Physeter catodon LOF (frameshift, premature stop, ss) Full No Multiple individual SRA XM_055091726.1

Statements

Type Excerpt DOI
Functional "OMP is a single-copygene that is strongly expressed in vertebrate OR neurons(Reisert etal.,2007), and this implies a critical role in olfaction. Functional studies and knockouts of OMP in mouse corroborate this role (Buiakova etal.,1996; Youngentob etal.,2001,2003)." 10.1016/j.ympev.2017.01.020
Mutation Description "Physeter macrocephalus (sperm whale) has a start codon mutation (ATG to GTG) that was confirmed by sequence reads in the SRA. The nearest alternative start codon in P. macrocephalus is 25 codons downstream. By contrast, all non- cetaceans have putative ATG start codons at the same codon position that is mutated to GTG in P. macrocephalus." 10.1016/j.ympev.2017.01.020
Phenotypic "Our results favor the echolocation-priority hypothesis for the evolution of OMP in odontocetes, and further suggest that two other olfactory-specific genes, CNGA2 and CNGA4, are inactivated in some odontocetes." 10.1016/j.ympev.2017.01.020

Curator Observations

Authors deposited isolated OMP sequences in GenBank with the following acession numbers KY496975-KY496991.