Reference Gene

Gene name Alias Species Exons Type Paralogs EC number OMIM
BEST1 bestrophin 1 ARB , BMD , BEST , RP50 , VMD2 , TU15B , Best1V1Delta2 Homo sapiens 13 protein-coding BEST4 , BEST3 , BEST2 607854

Summary

This gene encodes a member of the bestrophin gene family. This small gene family is characterized by proteins with a highly conserved N-terminus with four to six transmembrane domains. Bestrophins may form chloride ion channels or may regulate voltage-gated L-type calcium-ion channels. Bestrophins are generally believed to form calcium-activated chloride-ion channels in epithelial cells but they have also been shown to be highly permeable to bicarbonate ion transport in retinal tissue. Mutations in this gene are responsible for juvenile-onset vitelliform macular dystrophy (VMD2), also known as Best macular dystrophy, in addition to adult-onset vitelliform macular dystrophy (AVMD) and other retinopathies. Alternative splicing results in multiple variants encoding distinct isoforms.[provided by RefSeq, Nov 2008]

GeneOntology

Gene Loss events - BEST1 (6 results)

GL_ID Species Order Gene Loss Mechanism Loss Type Lineage Specific Citation
GL_56PMY0 Manis javanica Pholidota Gene deletion Full No 10.1093/icb/icy004
GL_DVAXN1 Trichechus manatus Sirenia LOF (frameshift, premature stop, ss) Full No 10.1093/icb/icy004
GL_M1RDYM Sorex araneus Eulipotyphla Gene deletion Full No 10.1093/icb/icy004
GL_MXCQOB Nannospalax galili Rodentia LOF (frameshift, premature stop, ss) Full No 10.1093/icb/icy004
GL_TZNCQZ Rhinolophus sinicus Chiroptera LOF (frameshift, premature stop, ss) Full No 10.1093/icb/icy004
GL_ZHPNHH Heterocephalus glaber Rodentia LOF (frameshift, premature stop, ss) Full No 10.1093/icb/icy004