Reference Gene
Gene name | Alias | Species | Exons | Type | Paralogs | EC number | OMIM |
---|---|---|---|---|---|---|---|
BEST1 bestrophin 1 | ARB , BMD , BEST , RP50 , VMD2 , TU15B , Best1V1Delta2 | Homo sapiens | 13 | protein-coding | BEST4 , BEST3 , BEST2 | 607854 |
Summary
This gene encodes a member of the bestrophin gene family. This small gene family is characterized by proteins with a highly conserved N-terminus with four to six transmembrane domains. Bestrophins may form chloride ion channels or may regulate voltage-gated L-type calcium-ion channels. Bestrophins are generally believed to form calcium-activated chloride-ion channels in epithelial cells but they have also been shown to be highly permeable to bicarbonate ion transport in retinal tissue. Mutations in this gene are responsible for juvenile-onset vitelliform macular dystrophy (VMD2), also known as Best macular dystrophy, in addition to adult-onset vitelliform macular dystrophy (AVMD) and other retinopathies. Alternative splicing results in multiple variants encoding distinct isoforms.[provided by RefSeq, Nov 2008]
GeneOntology
Gene Loss events - BEST1 (6 results)
GL_ID | Species | Order | Gene Loss Mechanism | Loss Type | Lineage Specific | Citation |
---|---|---|---|---|---|---|
GL_56PMY0 | Manis javanica | Pholidota | Gene deletion | Full | No | 10.1093/icb/icy004 |
GL_DVAXN1 | Trichechus manatus | Sirenia | LOF (frameshift, premature stop, ss) | Full | No | 10.1093/icb/icy004 |
GL_M1RDYM | Sorex araneus | Eulipotyphla | Gene deletion | Full | No | 10.1093/icb/icy004 |
GL_MXCQOB | Nannospalax galili | Rodentia | LOF (frameshift, premature stop, ss) | Full | No | 10.1093/icb/icy004 |
GL_TZNCQZ | Rhinolophus sinicus | Chiroptera | LOF (frameshift, premature stop, ss) | Full | No | 10.1093/icb/icy004 |
GL_ZHPNHH | Heterocephalus glaber | Rodentia | LOF (frameshift, premature stop, ss) | Full | No | 10.1093/icb/icy004 |