Reference Gene
Gene name | Alias | Species | Exons | Type | Paralogs | EC number | OMIM |
---|---|---|---|---|---|---|---|
OPN1SW opsin 1, short wave sensitive | BCP , BOP , CBT | Homo sapiens | 5 | protein-coding | RGR , RGR , GPR88 , GPR88 , RRH , RRH , OPN4 , OPN4 , OPN5 , OPN5 , RHO , RHO , OPN1MW2 , OPN1MW2 , OPN1MW3 , OPN1MW3 , OPN1MW , OPN1MW , OPN1LW , OPN1LW , OPN1SW , OPN3 , GPR52 , OPN3 , GPR52 | 613522 |
Summary
This gene belongs to the G-protein coupled receptor 1 family, opsin subfamily. It encodes the blue cone pigment gene which is one of three types of cone photoreceptors responsible for normal color vision. Defects in this gene are the cause of tritan color blindness (tritanopia). Affected individuals lack blue and yellow sensory mechanisms while retaining those for red and green. Defective blue vision is characteristic. [provided by RefSeq, Jul 2008]
GeneOntology
Gene Loss events - OPN1SW (46 results)
GL_ID | Species | Order | Gene Loss Mechanism | Loss Type | Lineage Specific | Citation |
---|---|---|---|---|---|---|
GL_SVVNVL | Globicephala melas | Artiodactyla | LOF (frameshift, premature stop, ss) | Full | No | 10.1371/journal.pgen.1003432 |
GL_TF9TLW | Balaenoptera musculus | Artiodactyla | LOF (frameshift, premature stop, ss) | Full | Cetacea | 10.1098/rspb.2002.2278 |
GL_TRWIBO | Eschrichtius robustus | Artiodactyla | LOF (frameshift, premature stop, ss) | Full | Cetacea | 10.1098/rspb.2002.2278 |
GL_TV4CYZ | Phocoenoides dalli | Artiodactyla | LOF (frameshift, premature stop, ss) | Polymorphic | No | 10.1371/journal.pgen.1003432 |
GL_U7E7CA | Eschrichtius robustus | Artiodactyla | LOF (frameshift, premature stop, ss) | Full | No | 10.1371/journal.pgen.1003432 |
GL_UINAJ6 | Phocoena phocoena | Artiodactyla | LOF (frameshift, premature stop, ss) | Full | Cetacea | 10.1098/rspb.2002.2278 |
GL_UL5CJF | Phocoena phocoena | Artiodactyla | LOF (frameshift, premature stop, ss) | Full | No | 10.1371/journal.pgen.1003432 |
GL_VWNOMW | Tursiops truncatus | Artiodactyla | LOF (frameshift, premature stop, ss) | Full | Cetacea | 10.1098/rspb.2002.2278 |
GL_XUN1N4 | Inia geoffrensis | Artiodactyla | LOF (frameshift, premature stop, ss) | Full | No | 10.1371/journal.pgen.1003432 |
GL_XWN6AN | Dasypus novemcinctus | Cingulata | LOF (frameshift, premature stop, ss) | Full | No | 10.1093/icb/icy004 |