Reference Gene

Gene name Alias Species Exons Type Paralogs EC number OMIM
OPN1SW opsin 1, short wave sensitive BCP , BOP , CBT Homo sapiens 5 protein-coding RGR , RGR , GPR88 , GPR88 , RRH , RRH , OPN4 , OPN4 , OPN5 , OPN5 , RHO , RHO , OPN1MW2 , OPN1MW2 , OPN1MW3 , OPN1MW3 , OPN1MW , OPN1MW , OPN1LW , OPN1LW , OPN1SW , OPN3 , GPR52 , OPN3 , GPR52 613522

Summary

This gene belongs to the G-protein coupled receptor 1 family, opsin subfamily. It encodes the blue cone pigment gene which is one of three types of cone photoreceptors responsible for normal color vision. Defects in this gene are the cause of tritan color blindness (tritanopia). Affected individuals lack blue and yellow sensory mechanisms while retaining those for red and green. Defective blue vision is characteristic. [provided by RefSeq, Jul 2008]

GeneOntology

Gene Loss events - OPN1SW (46 results)

GL_ID Species Order Gene Loss Mechanism Loss Type Lineage Specific Citation
GL_SVVNVL Globicephala melas Artiodactyla LOF (frameshift, premature stop, ss) Full No 10.1371/journal.pgen.1003432
GL_TF9TLW Balaenoptera musculus Artiodactyla LOF (frameshift, premature stop, ss) Full Cetacea 10.1098/rspb.2002.2278
GL_TRWIBO Eschrichtius robustus Artiodactyla LOF (frameshift, premature stop, ss) Full Cetacea 10.1098/rspb.2002.2278
GL_TV4CYZ Phocoenoides dalli Artiodactyla LOF (frameshift, premature stop, ss) Polymorphic No 10.1371/journal.pgen.1003432
GL_U7E7CA Eschrichtius robustus Artiodactyla LOF (frameshift, premature stop, ss) Full No 10.1371/journal.pgen.1003432
GL_UINAJ6 Phocoena phocoena Artiodactyla LOF (frameshift, premature stop, ss) Full Cetacea 10.1098/rspb.2002.2278
GL_UL5CJF Phocoena phocoena Artiodactyla LOF (frameshift, premature stop, ss) Full No 10.1371/journal.pgen.1003432
GL_VWNOMW Tursiops truncatus Artiodactyla LOF (frameshift, premature stop, ss) Full Cetacea 10.1098/rspb.2002.2278
GL_XUN1N4 Inia geoffrensis Artiodactyla LOF (frameshift, premature stop, ss) Full No 10.1371/journal.pgen.1003432
GL_XWN6AN Dasypus novemcinctus Cingulata LOF (frameshift, premature stop, ss) Full No 10.1093/icb/icy004